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2006 Publication List

Journal

1. Aiken, J. Fishwick, J.R., Lavender, S.J., Barlow, R., Moore, G.F., Sessions, H., Bernard, S., Ras, J. & Hardman-Mountford, N.J. (2006). Validation of MERIS reflectance and chlorophyll during the BENCAL cruise October, 2002: preliminary validation and new products for phytoplankton functional types and photosynthetic parameters. International Journal of Remote Sensing, 28 (3-4):497-516.
2. Allen JI, Archer S, Gilbert F, Blackford J, Taylor A. H., (2006). Changes in DMS production and flux in relation to decadal shifts in ocean circulation. Tellus B, 58B, 242 : 254
3. Anderson, T.R. (2006) Confronting complexity: reply to Le Quere and Flynn. Journal of Plankton Research, 28, (9), 877-878. (doi:10.1093/plankt/fbl016)
4. Bakker, D.C.E., P.W. Boyd, E.R. Abraham, M.A. Charette, J.A. Hall, S.D. Nodder, K. Safi, R.J. Singleton, T.W. Trull, A.M. Waite, A.J. Watson, J. Zeldis, E.R. Abraham, C.S. Law, and K. Tanneberger (2006) Matching carbon pools and fluxes in the Southern Ocean Iron Release Experiment (SOIREE). Deep-Sea Research I, 53: 1941-1960, doi:10.1016/j.dsr.2006.08.014.
5. Bargeron, C.P., D.J. Hydes, D.K. Woolf, B.A. Kelly-Gerreyn and M.A. Qurban. 2006. A regional analysis of new production on the Northwest European shelf using oxygen fluxes and a ship-of-opportunity. Estuarine Coastal and Shelf Science, 69(3-4), 478-490. doi:10.1016/j.ecss.2006.05.015
6. Barkley, M.P, P.S. Monks, R.L. Mittermeier, H. Fast, S. Körner, and M. Heimann, Comparisons between SCIAMACHY atmospheric CO2 retrieved using (FSI) WFM-DOAS to ground based FTIR data and to the TM3 chemistry transport model, Atmos.Chem.Phys., 6, 4483-4498, 2006.
7. Barkley, M.P., P.S. Monks, R.J. Engelen, Comparison of SCIAMACHY and AIRS CO2 measurements over North America during the summer and autumn of 2003, Geophys. Res. Lett., 33, L20805, doi:10.1029/2006GL026807, 2006.
8. Barkley, M.P., U. Frieß, P.S. Monks  (2006). Measuring atmospheric CO2 from space using Full Spectral Initiation (FSI) WFM-DOAS. Atmos. Chem. Phys. Discuss., 6, 2765-2807.
9. Carr M.E., Friedrichs M.A.M., Schmeltz M., Aite M.N., Antoine D., Arrigo K., Asanuma I, Aumont O., Barber R., Behrenfeld M., Bidigare R., Buitenhuis E., Campbell J., Ciotti A., Dierssen H., Dowell M., Dunne J., Esaias W., Gentili B., Groom SB, Hoepffner N., Hishisaka J., Kameda T., Le Quere C., Lohrenz S., Marra J., Melin F., Moore K., Morel A., Reddy T., Ryan J., Scardi M., Smyth TJ, Turpie K., Tilstone G, Waters K., Yamanaka Y., (2006). A comparison of global estimates of marine primary production from ocean color. Deep Sea Research II, 53, 741 : 770
10. D.G. Bowers and C.E. Binding (2006). Optical Properties of Mineral Suspended particles: a review and synthesis. Estuarine, Coastal and Shelf Science, 67, 219-230
11. Fasham, M.J.R., Flynn, K.J., Pondaven, P., Anderson, T.R. and Boyd, P.W. (2006) Development of a robust ecosystem model to predict the role of iron on biogeochemical cycles: a comparison of results for iron-replete and iron-limited areas, and the SOIREE iron-enrichment experiment. Deep-Sea Research I, 53, (2), 333-366. (doi:10.1016/j.dsr.2005.09.011)
12. Fishwick, J.R., Aiken, J.A., Barlow, R., Sessions, H., Bernard, S. & Ras, J. (2006). Relationships between phytoplankton pigments, photosynthetic parameters and optical properties of the southern Benguela ecosystem. Journal of the Marine Biological Association of the UK, 86: 1267-1280.
13. Gunson, J.R., Spall, S.A., Anderson, T.R., Jones, A., Roberts, D.L., Totterdell, I.J. and Woodage, M.J. (2006) Climate sensitivity to ocean dimethylsulphide emissions. Geophysical Research Letters, 33, (7), L07701. (doi:10.1029/2005GL024982)
14. Heywood JL, Zubkov MV, Tarran GA, Fuchs BM, Holligan PM, (2006). Prokaryoplankton standing stocks in oligotrophic gyre and equatorial provinces of the Atlantic Ocean: Evaluation of inter-annual variability. Deep Sea Research II Special Edition, Deep-Sea Research II: Topical Studies in Oceanography, 53, 1530 : 1547
15. Holt, J.T. and I.D. James (2006). "An assessment of the fine-scale eddies in a high-resolution model of the shelf seas west of Great Britain." Ocean Modelling, 13(3-4): 271-291
16. Jago, C.F., S.E. Jones, P. Sykes and T. Rippeth (2006). Temporal variation of suspended particulate matter and turbulence in a high energy, tide-stirred, coastal sea: Relative contributions of resuspension and disaggregation.  Continental Shelf Research, 26, 2019-2028.
17. Lewis K, Allen JI, Richardson AJ, Holt JT, (2006). Error quantification of a high resolution coupled hydrodynamic-ecosystem coastal-ocean model: Part3, validation with Continuous Plankton Recorder data. Journal of Marine Systems, 63, 209 : 224
18. Miller, P.I., (2006) They are watching us: Earth Observation advances in water quality monitoring, Oceanology Today, 6 (Winter 2005/6), 34.
19. Miller, P.I., J.D. Shutler, G.F. Moore, and S.B. Groom, (2006) SeaWiFS discrimination of harmful algal bloom evolution, International Journal of Remote Sensing, 27 (11), 2287-2301.
20. Pinkerton, M.H., Moore, G.F., Lavender, S.J., Gall, M.P., Oubelkheir, K., Richardson, K.M., Boyd, P.W. and Aiken, J. (2006). A method for estimating inherent optical properties of New Zealand continental shelf waters from satellite ocean colour measurements. New Zealand Journal of Marine and Freshwater Research, 40, pp 227-247.
21. Popova, E.E., Coward, A.C., Nurser, G.A., de Cuevas, B. and Anderson, T.R. (2006) Mechanisms controlling primary and new production in a global ecosystem model Part II: The role of the upper ocean short-term periodic and episodic mixing events. Ocean Science, 2, 267-279.
22. Popova, E.E., Coward, A.C., Nurser, G.A., de Cuevas, B., Fasham, M.J.R. and Anderson, T.R. (2006) Mechanisms controlling primary and new production in a global ecosystem model Part I: Validation of the biological simulation. Ocean Science, 2, 249-266.
23. Poulton AJ, Holligan PM, Hickman A, Kim Y-N, Adey TR, Stinchcombe MC, Holten C, Woodward EMS, (2006). Size-fractionated carbon fixation, chlorophyll-biomass and diagnostic pigments in the Atlantic Ocean. Deep Sea Research II, 53, 1593 : 1610
24. Poulton A J, Sanders P, Holligan PM, Stinchcombe MC, Addey J, Brown , Chamberlain K (2006). Phytoplankton mineralization in the Atlanitic Ocean. Glob. Biogeochem. Cyc., 20, 1 : 10
25. Pradhan, Y., Lavender, S.J., Hardman-Mountford, N.J. and Aiken, J. 2006. Seasonal and inter-annual variability of chlorophyll-a concentration in the Mauritanian upwelling: Observation of an anomalous event during 1998-1999. AMT Deep-Sea Research II Special Issue, 53, pp 1548-1559.
26. Raitsos, D.E., Lavender, S.J., Pradhan, Y., Tyrrell, T., Reid, P.C. and Edwards, M. 2006. Coccolithophore bloom size variation in response to the regional environment of the subarctic North Atlantic. Limnology and Oceanography, 51, pp 2122-2130.
27. Robinson C, Holligan PM, Jickells T, (2006). The Atlantic Transect Programme - Preface. Deep Sea Research II, 53, 14 - 16, 1483 : 1484
28. Robinson C, Poulton AJ, Holligan PM, Baker AR, Forster G, Gist N, Jickells T, Malin G, Upstill Goddard R C, Williams RG, Woodward EMS, Zubkov MV, (2006). The Atlantic Meridional Transect (AMT) Programme: a contextual view 1995 - 2005. Deep Sea Research II, 1485 : 1515
29. Smyth, T.J., G.F. Moore, T. Hirata & J. Aiken (2006). A semi-analytical model for the derivation of ocean color inherent optical properties: description, implementation and performance assessment. Applied Optics 45 (31): 8116-8131.
30. Suggett, DJ, Moore, CM, Maranon, E, Omachi, C., Varela, RA, Aiken, J and Holligan, PM, 2006. Photosynthetic electron turnover in the tropical and subtropical Atlantic Ocean.. Deep Sea Research II, 53, 1573-1592.
31. Tsimplis, M.N., A.G.P. Shaw, R.A. Flather and D.K. Woolf. 2006. The influence of the North Atlantic Oscillation on the sea level around the northern European coasts reconsidered: the thermosteric effects. Philosophical Transactions: Mathematical, Physical & Engineering Sciences, 364, 845-856, doi: 10.1098/rsta2006.1740.
32. Watson, A. J., and Naveira-Garabato, A. C. (2006) The role of Southern Ocean mixing and upwelling in glacial-interglacial atmospheric CO2 change. Tellus 58 B, 73-87
33. Wolf, J. and D.K.Woolf. 2006. Waves and climate change in the north-east Atlantic. Geophysical Research Letters, 33, L06604, doi:10.1029/2005GL025113.

Book Chapters

1. Robinson, I.S. 2006. Satellite measurements for operational models, in Chassignet, E. P. and Verron, J. (Editors)  Ocean Weather Forecasting, chapter 6, 147-189, Springer, Dordrecht.
2. Woolf, D.K. and N. Ward. 2006. Thermal imagery of surface renewal phenomena. In Marine Surface Films: Chemical Characteristics, Influence on Air-Sea Interactions, and Remote Sensing, edited by Martin Gade, Heinrich Hühnerfuss, and Gerald M. Korenowski. Springer Verlag,  Heidelberg, Germany, pp. 225-238.

Reports

1. Field, J., Platt, T., Sathyendranath, S., Hardman-Mountford, N., Lutz, V., Rast, M. & Tilstone, G. (2006). Interim Report of the Plymouth Chlorophyll Meeting and Workshops (Extended Antares Network). Sponsored by GOOS, GEO, PML and POGO. Plymouth, 18-22 Sep 2006. GEO Task EC-06-07.
2. Hardman-Mountford N.J., Huthnance J. (2006). The development of useful indicators for Marine Processes & Climate (MPC) and Underwater Sound.IACMST, March 2006.
3. Hardman-Mountford, N.J. (2006). Product O.4 Global gridded time series of oceanic chlorophyll-a concentration from ocean colour. In: GCOS. Systematic Observation Requirements for Satellite-based Products for Climate. Supplemental details to the satellite-based component of the "Implementation Plan for the Global Observing System for Climate in Support of the UNFCCC". Sep 2006. GCOS 107 (WMO/TD No. 1338).
4. Platt, T., Hardman-Mountford, N., Field, J. 2006. Report of C-GOOS Chlorophyll Pilot Project Pre-Planning Meeting, INCOIS, Hyderabad, India, January 21-22 2006.

 Theses

1. Barkley, M.P. (2006) Measuring atmospheric CO2 from space using Full Spectral Initiation (FSI) WFM-DOAS. PhD Thesis. University of Leicester.
2. Raitsos, D.E. (2006) Understanding of the Variability of Phytoplankton Ecosystem Function Properties: A Synergistic use of Remote Sensing and In Situ Data. PhD Thesis. University of Plymouth.

Proceedings

1. Barkley, M.P., P.S. Monks, Udo Frieß, R.L. Mittermeier, H. Fast, S. Körner, and M. Heimann (2006). Measuring atmospheric CO2 from Space using Full Spectral Initiation (FSI) WFM-DOAS: Initial Results and Validation. ESA Atmospheric Science Conference, 8-12th May 2006, ESRIN, Frascati, Italy. 6pp.
2. Challenor, P., D. Woolf, C. Gommenginger, M. Srokosz, D. Carter , D. Cotton and N. Sykes. 2006. Satellite altimetry: A revolution in understanding the wave climate. In “15 Years of Progress in Radar Altimetry” Symposium Proceedings, SP-614 (CD), ESA.
3. Lavender, S., Pinkerton, M., Moore, G., Pradhan, Y. and Aiken, J. 2006. An Inter-Comparison of Ocean Colour Inherent Optical Property Models and Bio-Optical Algorithms. Ocean Optics XVIII CDROM, 7 pp.
4. Woolf, D.K., C. Gommenginger, N. Sykes, M.A. Srokosz and P.G. Challenor. 2006. Satellite and other long-term data sets on wave climate; application to the North Atlantic region. Full Proceedings of World Renewable Energy Congress IX, Renewable Energy, MT11, Elsevier, ISBN 008 44671 X.

Articles

1. Woolf, D.K. 2006. Recent developments in parameterization of air-sea gas exchange. Flux News, 2

Multimedia

1. CASIX website. http://casix.nerc.ac.uk/
2. Woolf, D. and Coll, J. 2006. Impacts of Climate Change on Storms and Waves. In Marine Climate Change Impacts Annual Report Card 2006 (Eds. Buckley, P.J, Dye, S.R. and Baxter, J.M), Online Summary Reports, MCCIP, Lowestoft, www.mccip.org.uk.

Abstracts

1. Allen JI, Blackford J, Holt JT, Holt M, Siddorn JR, (2006). Towards forecast of the NW European Coastal Shelf: benchmarking model performance. Proceedings of the 4th international EuroGOOS European Operational Oceanography: Present and Future, 482 : 487
2. Bakker, D.C.E., Nielsdottír, M.C., Morris, P., Pollard, R.T., Sanders, R., Venables, H.J., Watson, A.J., 02/07/04/2006. Quantifying the island mass effect for the marine carbon cycle at the Crozet Plateau in the Southern Indian Ocean. European Geophysical Union 2006, Vienna, Austria.
3. Bowers, D.G., C.E. Binding, K. Ellis, S.E. Jones and E.G. Mitchelson-Jacob (2006). Variation in optical properties along a turbulence gradient in shelf seas. (Abstract). Proceedings of the Coastal and Shelf Seas, Present Understanding and Future Challenges Conference, 10-12 April 2006, Bangor.
4. Fangohr, S., D. K. Woolf and P. Challenor. 2006. Deriving climatological air-sea CO2 flux from global altimeter data (Poster). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
5. Fishwick, J., Hardman-Mountford, T., Smyth, T., Aiken, J. (2006). Interpretation of global remotely sensed ocean colour data in terms of phytoplankton functional types and photosynthetic parameter values (Poster). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
6. Gommenginger, C., N. Sykes, D. Woolf, P. Challenor and M. Srokosz. 2006. Trends and variability of the wind and wave climate of the North Atlantic with a new climatology of altimeter-derived products. EOS Trans. AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46H-07.
7. Hardman-Mountford, N.J., Hirata, T., Richardson, K. & Aiken, J. (2006). Do ecological provinces exist in the ocean? (Poster). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
8. Hardman-Mountford, N.J., Hirata, T., Richardson, K. & Aiken, J. 2006. Do ecological provinces exist in the ocean? EOS Trans. AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS32K-O2.
9. Hemmings, J.C.P., Barciela, R.M., Martin, M.J., Hines, A. (2006). A material balancing scheme for ocean colour data assimilation (Poster). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
10. Hind, A.J., Bakker, D.C.E., Frickers, T.E., Pope, N., Watson, A.J., 20/09/2006. Carbonate system measurements on AMT cruises 12-17. Poster. Atlantic Ocean Biogeochemistry and Biodiversity. Atlantic Meridional Transect. The Royal Society, London, UK.
11. Hirata, T. (2006). Spatial mapping of suspended particle size spectra in seawater from ocean colour measurements (Poster). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
12. Jeffery, C.D., D.K. Woolf, I.S. Robinson and C.J. Donlon. 2006. 1-Dimensional modelling of heat and gas exchange in the Tropical Atlantic using the General Ocean Turbulence Model (GOTM). Geophysical Research Abstracts, Vol. 8, EGU06.
13. Jones, S.E., G. Mitchelson-Jacob, S. Gaffney (2006). Relative contributions of primary production and local resuspension to suspended particle populations in the Western Irish Sea. Geophysical Research Abstracts, 8, 08292, EGU Vienna, 2006.
14. Keith Haines, Jon Blower, Chunlei Liu, Adit Santokhee, Delivering NCOF operational marine data through the Internet, Proceedings of the IMarEst World Maritime Technology Conference 6-10 March 2006
15. Kettle, H., Merchant, C. (2006). Modelling marine photosynthesis: sensitivity to spectral resolution of light and effect on air-sea CO2 flux (Talk). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
16. Kyte, E., D. Bowers & G. Mitchelson-Jacob (2006). Remote Sensing of Chlorophyll Concentrations in Turbid Shelf Seas: Correcting a NASA Algorithm (Abstract). Proceedings of the Coastal and Shelf Seas, Present Understanding and Future Challenges Conference, 10-12 April 2006, Bangor.
17. Lavender, S. (2006). Application of Ocean Colour to Ecosystem Dynamics (Keynote talk). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
18. Martin, M.J., A. Hines, J. Stark, R. Barciela, J. Hemmings, 2006. Development of the FOAM ocean data assimilation system. 4th WMO International Symposium on Assimilation of Observations in Meteorology and Oceanography, Prague, April 2005
19. Mikkelsen, OA, CF Jago, SE Jones, V Krivtsov, EG Mitchelson-Jacob (2006). Suspended matter interaction with phytoplankton in the thermocline (Abstract). Proceedings of the Coastal and Shelf Seas, Present Understanding and Future Challenges Conference, 10-12 April 2006, Bangor.
20. Miller, P.I., and J.T. Holt, (2006) Validation of a high-resolution ocean shelf model using automated front detection (Abstract), in Workshop on Indices of Mesoscale Structures, Nantes, France, 2006.
21. Monks, P. (2006). Measuring atmospheric CO2 from space using Full Spectral Initiation (FSI) WFM-DOAS (Abstract). ESA Atmospheric Science Conference, ESA-ESRIN, Frascati, Italy, 8-12/5/2006. http://earth.esa.int/cgi-bin/confatmos06.pl?abstract=356.
22. Potter, R.C.H., E.G. Mitchelson-Jacob, S. Fangohr and D. Woolf, (2006). Detecting slicks in the Irish Sea from different satellite sensors, Abstract and presentation, SEASAR 2006, Advances in SAR Oceanography from ENVISAT and ERS missions, 23-26 January 2006, Frascati-Rome-Italy (Abstract).
23. Smyth, T., Moore, G., Hirata, T., Aiken, J. (2006). An ocean colour inherent optical property model: description, validation and application (Talk). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.
24. Wallace, D., Bakker, D.C.E., Heinze, C., Hood, M., Wanninkhof, R., 05/04/2006. Session OS7 Ocean carbon source and sink assessments. European Geophysical Union, Vienna, Austria.
25. Wallace, D., Heinze, C., Hood, M., Wanninkhof, W., Bakker, D.C.E., 02-07/04/2006. Session Ocean carbon sources and sink assessments. European Geophysical Union 2006, Vienna, Austria.
26. Woolf, D.K. 2006. A framework for modelling bubble-mediated air-sea gas transfer. EOS Trans. AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS14C-01.
27. Woolf, D.K. 2006. Transfer velocities of biogenic gases at high wind speeds. Edinburgh, 21st June, EO Workshop (Talk). Biodynamics: Modelling and Observation of the Biosphere, NERC EO Conference 2006, Book of Abstracts. Edinburgh, 21 June 2006.